Search results for "Voltage gradient"

showing 5 items of 5 documents

Increasing voltage gradient electrophoresis of DNA

2007

We developed a method which allows electrophoretic fractionation of DNA in an agarose matrix according to an increasing current gradient, using a previously designed [R. Barbieri, V. Izzo, M.A. Costa, G. Giudice, G. Duro, Anal. Biochem. 212 (1993) 168; M.R. Asaro, V. Izzo, R. Barbieri, J. Chromatogr. A 855 (1999) 723] voltage gradient apparatus. This method allows the separation of different DNA fragments by increasing the distances of the components fractionated in the gel, revealing small differences in the length of different DNA components.

Electrophoresis Agar GelGel electrophoresisChromatographyOrganic ChemistryVoltage gradientDNAGeneral MedicineFractionationVGGE electrophoresisDNA MitochondrialBiochemistryAnalytical ChemistryMatrix (chemical analysis)chemistry.chemical_compoundElectrophoresisSettore BIO/18 - GeneticachemistryAgaroseRestriction fragment length polymorphismDNA
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Improved resolution power of electrophoretic fractionation of DNA using a voltage gradient up and down application

2004

The improved resolution power of electrophoretic fractionation of DNA in a wide range of molecular masses is demonstrated using an "up and down" application of voltage gradient gel electrophoresis (VGGE). This application also allows separation of different DNA fragments which are poorly fractionated in conventional electrophoresis.

Free-flow electrophoresisGel electrophoresisElectrophoresisDNA fractionationChromatographyGel electrophoresis of nucleic acidsResolution (mass spectrometry)Voltage gradient gel electrophoresisChemistryClinical BiochemistryAnalytical chemistryFractionationDNABiochemistryELECTROPHORESIS INSTRUMENTATIONAnalytical Chemistrychemistry.chemical_compoundElectrophoresisIndicators and ReagentsDNA
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Modified apparatus for voltage gradient gel electrophoresis.

1999

We built a modified version of voltage gradient gel electrophoresis system to correct distortions in nucleic acids electrophoretic migration patterns occurring at the edges of the gel when the original voltage gradient apparatus is used. The new device allows correct fractionation of nucleic acids also when electrophoresis is performed at high voltages.

Gel electrophoresisChromatographyChemistryOrganic ChemistryAnalytical chemistryVoltage gradientGeneral MedicineFractionationEquipment DesignBiochemistryAnalytical ChemistryElectrophoresisNucleic acidPulsed-field gel electrophoresisElectrophoresis Polyacrylamide GelElectric potentialVoltageJournal of chromatography. A
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Enhanced hybridization labeling signals in Southern blotted DNAs fractionated with voltage gradient gel electrophoresis.

1998

An enhancement of hybridization labeling signals is demonstrated in Southern blotted DNAs, fractionated by voltage gradient gel electrophoresis. This enhancement is due to a reduced thickness of each single nucleic acid band in the gel as a consequence of the gradient effect, corresponding to an increased concentration of DNA per unit area.

Gel electrophoresisElectrophoresis Agar GelChromatographyGel electrophoresis of nucleic acidsClinical BiochemistryVoltage gradientMembrane ProteinsNucleic Acid HybridizationDNAChemical FractionationBiochemistryAnalytical Chemistrychemistry.chemical_compoundBlotting SouthernchemistryMolecular-weight size markerSea UrchinsNucleic acidPulsed-field gel electrophoresisElectrochemistryAnimalsDNASouthern blotElectrophoresis
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Type V collagen-induced upregulation of capn2 (large subunit of m-calpain) gene expression and DNA fragmentation in 8701-BC breast cancer cells

2011

Abstract Type V collagen is known to be over-deposited in the stroma of ductal infiltrating carcinomas of the breast. When used as a substrate, type V collagen restrains growth and invasion, and affects gene expression of 8701-BC ductal infiltrating carcinomas cells. Here we supplement existing data by demonstrating type V collagen dependent upregulation of capn2 gene expression in 8701-BC cells through differential display-PCR and Western blot assays. Furthermore, we suggest that our data obtained by centrifugal sedimentation and electrophoresis strongly suggest a correlation between calpain overproduction and DNA fragmentation, since the incubation with calpain inhibitor partly reverts th…

centrifugal sedimentationProtein subunitClinical BiochemistryBreast NeoplasmsDNA FragmentationPolymerase Chain ReactionBiochemistryGene Expression Regulation EnzymologicStromaWestern blotDownregulation and upregulationCell Line TumorGene expressionmedicineHumansSettore BIO/06 - Anatomia Comparata E CitologiaOverproductionMolecular Biologybiologymedicine.diagnostic_testCalpainChemistryGene Expression ProfilingCalpainDNA NeoplasmMolecular biologyUp-Regulationcalpain inhibitordifferential display-PCRgene expressionbiology.proteinDNA fragmentationFemalevoltage gradient gel electrophoresisCollagen Type VBiological Chemistry
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